Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hist3h2bbQ8CGP0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm7291-201ENSMUST00000199147 382 ntBASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm9959-201ENSMUST00000068277 390 ntBASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hist3h2bbQ8CGP0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.27□□□□□ -0.6
Hist3h2bbQ8CGP0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm13234-201ENSMUST00000120010 747 ntBASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm45417-201ENSMUST00000209533 758 ntBASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hist3h2bbQ8CGP0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms