Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Gm13884-201ENSMUST00000118103 829 ntBASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Gm12497-201ENSMUST00000138778 237 ntBASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Efs-202ENSMUST00000227037 2540 ntBASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rft1Q8C3B8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Gm6257-201ENSMUST00000163864 910 ntBASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Gm6376-201ENSMUST00000209407 580 ntBASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rft1Q8C3B8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Gm4459-201ENSMUST00000118750 468 ntBASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.28□□□□□ -0.28
Rft1Q8C3B8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Mzt1-203ENSMUST00000227948 952 ntBASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.28□□□□□ -0.28
Rft1Q8C3B8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms