Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Usp44Q8C2S0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp44Q8C2S0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp44Q8C2S0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp44Q8C2S0 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.4■□□□□ 0.38
Usp44Q8C2S0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp44Q8C2S0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.39■□□□□ 0.38
Usp44Q8C2S0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp44Q8C2S0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
Usp44Q8C2S0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp44Q8C2S0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Gm11025-201ENSMUST00000140773 466 ntBASIC17.38■□□□□ 0.37
Usp44Q8C2S0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp44Q8C2S0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Gm6973-201ENSMUST00000117080 721 ntBASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Gm23547-201ENSMUST00000158210 271 ntBASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Usp44Q8C2S0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp44Q8C2S0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms