Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trub1Q8C0D0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trub1Q8C0D0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
Trub1Q8C0D0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trub1Q8C0D0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trub1Q8C0D0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trub1Q8C0D0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trub1Q8C0D0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Gm16198-201ENSMUST00000118766 670 ntBASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Gm5177-201ENSMUST00000183092 997 ntBASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trub1Q8C0D0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trub1Q8C0D0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trub1Q8C0D0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms