Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3rf2Q8BZT2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Gm8410-201ENSMUST00000117225 605 ntBASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3rf2Q8BZT2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf2Q8BZT2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf2Q8BZT2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf2Q8BZT2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf2Q8BZT2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.05■□□□□ 0
Sh3rf2Q8BZT2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3rf2Q8BZT2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Gm29541-201ENSMUST00000191351 678 ntBASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf2Q8BZT2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Gm38294-201ENSMUST00000192831 381 ntBASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf2Q8BZT2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf2Q8BZT2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms