Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trerf1Q8BXJ2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trerf1Q8BXJ2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.71■□□□□ 0.1
Trerf1Q8BXJ2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trerf1Q8BXJ2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.7■□□□□ 0.1
Trerf1Q8BXJ2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Gm15590-201ENSMUST00000078419 552 ntBASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.69■□□□□ 0.1
Trerf1Q8BXJ2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trerf1Q8BXJ2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms