Protein–RNA interactions for Protein: Q8BQQ8

B430305J03Rik, RIKEN cDNA B430305J03 gene, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B430305J03RikQ8BQQ8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
B430305J03RikQ8BQQ8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm13464-201ENSMUST00000119418 935 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm7284-201ENSMUST00000131667 944 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm33142-201ENSMUST00000193913 867 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
B430305J03RikQ8BQQ8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Gm14042-201ENSMUST00000120139 833 ntBASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
B430305J03RikQ8BQQ8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
B430305J03RikQ8BQQ8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
B430305J03RikQ8BQQ8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
B430305J03RikQ8BQQ8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.29□□□□□ -0.6
B430305J03RikQ8BQQ8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
B430305J03RikQ8BQQ8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms