Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col16a1Q8BLX7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Gm4984-201ENSMUST00000115987 360 ntBASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Gm9252-201ENSMUST00000172364 1602 ntBASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Gm15460-201ENSMUST00000118147 391 ntBASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col16a1Q8BLX7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 BC037039-201ENSMUST00000192003 2205 ntBASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Mir1982-201ENSMUST00000157368 74 ntBASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Gm7067-201ENSMUST00000207698 1249 ntBASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.22■□□□□ 0.67
Col16a1Q8BLX7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col16a1Q8BLX7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.21■□□□□ 0.66
Col16a1Q8BLX7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Col16a1Q8BLX7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Gm15393-201ENSMUST00000120499 219 ntBASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Gm9200-201ENSMUST00000118513 1354 ntBASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col16a1Q8BLX7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col16a1Q8BLX7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms