Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.51□□□□□ -0.09
Trim50Q810I2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim50Q810I2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim50Q810I2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Gm43514-201ENSMUST00000198852 424 ntBASIC14.5□□□□□ -0.09
Trim50Q810I2 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.5□□□□□ -0.09
Trim50Q810I2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.5□□□□□ -0.09
Trim50Q810I2 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.5□□□□□ -0.09
Trim50Q810I2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim50Q810I2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim50Q810I2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim50Q810I2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim50Q810I2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Trim50Q810I2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim50Q810I2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.48□□□□□ -0.09
Trim50Q810I2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim50Q810I2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trim50Q810I2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim50Q810I2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim50Q810I2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms