Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Gm37230-201ENSMUST00000194491 818 ntBASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Olfr286-202ENSMUST00000205305 969 ntBASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx55Q6ZPL9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx55Q6ZPL9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx55Q6ZPL9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Ddx55Q6ZPL9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx55Q6ZPL9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Gm13829-201ENSMUST00000119600 138 ntBASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Mir125a-201ENSMUST00000083545 68 ntBASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx55Q6ZPL9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx55Q6ZPL9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Gm11918-201ENSMUST00000121660 179 ntBASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Gm18062-201ENSMUST00000208020 547 ntBASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Gm18055-201ENSMUST00000208254 547 ntBASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx55Q6ZPL9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms