Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Gm15693-201ENSMUST00000120470 637 ntBASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Npc1l1Q6T3U4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Gm13223-201ENSMUST00000118609 747 ntBASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Gm13464-201ENSMUST00000119418 935 ntBASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Npc1l1Q6T3U4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Gm12151-201ENSMUST00000121374 290 ntBASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Npc1l1Q6T3U4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Mir6977-201ENSMUST00000184960 64 ntBASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Gm38294-201ENSMUST00000192831 381 ntBASIC17.77■□□□□ 0.44
Npc1l1Q6T3U4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms