Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Gm6973-201ENSMUST00000117080 721 ntBASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd1Q6PIP5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Gm15593-201ENSMUST00000122085 1008 ntBASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Gm29340-201ENSMUST00000188763 3854 ntBASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Celf4-206ENSMUST00000224553 1729 ntBASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd1Q6PIP5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Mir6956-201ENSMUST00000183598 62 ntBASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Gm43767-201ENSMUST00000198933 381 ntBASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nudcd1Q6PIP5 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms