Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.16■□□□□ 0.66
Chd4Q6PDQ2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chd4Q6PDQ2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd4Q6PDQ2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd4Q6PDQ2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chd4Q6PDQ2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Chd4Q6PDQ2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Gm12091-201ENSMUST00000146791 830 ntBASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Gm5279-201ENSMUST00000199575 745 ntBASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chd4Q6PDQ2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm9908-201ENSMUST00000211534 448 ntBASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm42632-201ENSMUST00000201707 2411 ntBASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Gm28631-201ENSMUST00000190740 334 ntBASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chd4Q6PDQ2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms