Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd3Q6P9Z1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd3Q6P9Z1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm27646-201ENSMUST00000183989 110 ntBASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Gm17807-201ENSMUST00000186869 298 ntBASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Ank2-226ENSMUST00000189368 339 ntBASIC13.66□□□□□ -0.22
Smarcd3Q6P9Z1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms