Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tgfbr1Q64729 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Gm4459-201ENSMUST00000118750 468 ntBASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.19□□□□□ -0.46
Tgfbr1Q64729 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tgfbr1Q64729 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.19□□□□□ -0.46
Tgfbr1Q64729 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Mir7071-201ENSMUST00000184847 69 ntBASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tgfbr1Q64729 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms