Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VclQ64727 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VclQ64727 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VclQ64727 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VclQ64727 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VclQ64727 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VclQ64727 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
VclQ64727 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
VclQ64727 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.63□□□□□ -0.07
VclQ64727 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VclQ64727 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.63□□□□□ -0.07
VclQ64727 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.63□□□□□ -0.07
VclQ64727 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.63□□□□□ -0.07
VclQ64727 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VclQ64727 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.62□□□□□ -0.07
VclQ64727 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.62□□□□□ -0.07
VclQ64727 BC037039-201ENSMUST00000192003 2205 ntBASIC14.62□□□□□ -0.07
VclQ64727 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
VclQ64727 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.62□□□□□ -0.07
VclQ64727 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.62□□□□□ -0.07
VclQ64727 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
VclQ64727 Gm16198-201ENSMUST00000118766 670 ntBASIC14.62□□□□□ -0.07
VclQ64727 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.62□□□□□ -0.07
VclQ64727 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.62□□□□□ -0.07
VclQ64727 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.62□□□□□ -0.07
VclQ64727 Gm25911-201ENSMUST00000157621 56 ntBASIC14.62□□□□□ -0.07
VclQ64727 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.62□□□□□ -0.07
VclQ64727 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.62□□□□□ -0.07
VclQ64727 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VclQ64727 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
VclQ64727 Gm5867-201ENSMUST00000063197 592 ntBASIC14.62□□□□□ -0.07
VclQ64727 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.62□□□□□ -0.07
VclQ64727 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VclQ64727 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VclQ64727 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.61□□□□□ -0.07
VclQ64727 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
VclQ64727 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.61□□□□□ -0.07
VclQ64727 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.61□□□□□ -0.07
VclQ64727 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.61□□□□□ -0.07
VclQ64727 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.61□□□□□ -0.07
VclQ64727 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
VclQ64727 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.61□□□□□ -0.07
VclQ64727 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.61□□□□□ -0.07
VclQ64727 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VclQ64727 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms