Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm25925-201ENSMUST00000158314 306 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm5312-201ENSMUST00000203728 547 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.53■□□□□ 0.4
Ctr9Q62018 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.52■□□□□ 0.4
Ctr9Q62018 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.52■□□□□ 0.4
Ctr9Q62018 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.52■□□□□ 0.4
Ctr9Q62018 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.52■□□□□ 0.4
Ctr9Q62018 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.52■□□□□ 0.4
Ctr9Q62018 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.52■□□□□ 0.4
Ctr9Q62018 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ctr9Q62018 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctr9Q62018 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctr9Q62018 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ctr9Q62018 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctr9Q62018 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ctr9Q62018 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ctr9Q62018 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ctr9Q62018 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ctr9Q62018 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctr9Q62018 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.51■□□□□ 0.39
Ctr9Q62018 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctr9Q62018 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.51■□□□□ 0.39
Ctr9Q62018 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctr9Q62018 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Ctr9Q62018 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.5■□□□□ 0.39
Ctr9Q62018 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
Ctr9Q62018 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Ctr9Q62018 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.5■□□□□ 0.39
Ctr9Q62018 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.5■□□□□ 0.39
Ctr9Q62018 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctr9Q62018 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms