Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cmc4Q61908 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cmc4Q61908 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cmc4Q61908 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cmc4Q61908 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cmc4Q61908 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.83□□□□□ -0.68
Cmc4Q61908 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cmc4Q61908 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.82□□□□□ -0.68
Cmc4Q61908 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.82□□□□□ -0.68
Cmc4Q61908 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.82□□□□□ -0.68
Cmc4Q61908 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Cmc4Q61908 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.82□□□□□ -0.68
Cmc4Q61908 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cmc4Q61908 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 AC093043.3-201ENSMUST00000226531 2273 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm16198-201ENSMUST00000118766 670 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm18057-201ENSMUST00000208220 503 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm45747-201ENSMUST00000212203 999 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm9182-201ENSMUST00000217829 639 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm10175-201ENSMUST00000086013 645 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.81□□□□□ -0.68
Cmc4Q61908 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cmc4Q61908 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cmc4Q61908 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cmc4Q61908 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 122.6 ms