Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.05□□□□□ -0.48
Zic4Q61467 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Zic4Q61467 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.05□□□□□ -0.48
Zic4Q61467 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.04□□□□□ -0.48
Zic4Q61467 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Zic4Q61467 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Gm15358-201ENSMUST00000119249 520 ntBASIC12.04□□□□□ -0.48
Zic4Q61467 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.04□□□□□ -0.48
Zic4Q61467 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.04□□□□□ -0.48
Zic4Q61467 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.04□□□□□ -0.48
Zic4Q61467 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Zic4Q61467 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.04□□□□□ -0.48
Zic4Q61467 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.04□□□□□ -0.48
Zic4Q61467 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.04□□□□□ -0.48
Zic4Q61467 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.04□□□□□ -0.48
Zic4Q61467 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.04□□□□□ -0.48
Zic4Q61467 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Zic4Q61467 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Zic4Q61467 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Zic4Q61467 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Zic4Q61467 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Zic4Q61467 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.03□□□□□ -0.48
Zic4Q61467 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.03□□□□□ -0.48
Zic4Q61467 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.03□□□□□ -0.48
Zic4Q61467 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.03□□□□□ -0.48
Zic4Q61467 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.03□□□□□ -0.48
Zic4Q61467 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.03□□□□□ -0.48
Zic4Q61467 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Zic4Q61467 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Zic4Q61467 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Zic4Q61467 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.02□□□□□ -0.49
Zic4Q61467 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Gm10013-201ENSMUST00000106074 672 ntBASIC12.02□□□□□ -0.49
Zic4Q61467 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.02□□□□□ -0.49
Zic4Q61467 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Zic4Q61467 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms