Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.3□□□□□ -0.12
ClpbQ60649 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ClpbQ60649 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ClpbQ60649 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.3□□□□□ -0.12
ClpbQ60649 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.29□□□□□ -0.12
ClpbQ60649 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ClpbQ60649 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.29□□□□□ -0.12
ClpbQ60649 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
ClpbQ60649 Mir3113-201ENSMUST00000175478 76 ntBASIC14.29□□□□□ -0.12
ClpbQ60649 Gm8318-201ENSMUST00000182954 872 ntBASIC14.29□□□□□ -0.12
ClpbQ60649 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ClpbQ60649 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClpbQ60649 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.28□□□□□ -0.12
ClpbQ60649 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ClpbQ60649 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.28□□□□□ -0.12
ClpbQ60649 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ClpbQ60649 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ClpbQ60649 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.28□□□□□ -0.12
ClpbQ60649 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ClpbQ60649 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.28□□□□□ -0.12
ClpbQ60649 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClpbQ60649 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ClpbQ60649 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClpbQ60649 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
ClpbQ60649 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.27□□□□□ -0.13
ClpbQ60649 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.27□□□□□ -0.13
ClpbQ60649 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
ClpbQ60649 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClpbQ60649 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ClpbQ60649 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClpbQ60649 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms