Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.73□□□□□ -0.05
Scn2bQ56A07 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gm15173-201ENSMUST00000122049 433 ntBASIC14.73□□□□□ -0.05
Scn2bQ56A07 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gm23547-201ENSMUST00000158210 271 ntBASIC14.73□□□□□ -0.05
Scn2bQ56A07 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Gm6089-201ENSMUST00000197666 938 ntBASIC14.73□□□□□ -0.05
Scn2bQ56A07 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn2bQ56A07 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.72□□□□□ -0.05
Scn2bQ56A07 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Scn2bQ56A07 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn2bQ56A07 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.71□□□□□ -0.05
Scn2bQ56A07 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.71□□□□□ -0.05
Scn2bQ56A07 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.71□□□□□ -0.05
Scn2bQ56A07 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.71□□□□□ -0.05
Scn2bQ56A07 Gm7230-201ENSMUST00000173026 815 ntBASIC14.71□□□□□ -0.05
Scn2bQ56A07 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.71□□□□□ -0.05
Scn2bQ56A07 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.71□□□□□ -0.05
Scn2bQ56A07 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn2bQ56A07 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn2bQ56A07 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn2bQ56A07 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn2bQ56A07 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.7□□□□□ -0.06
Scn2bQ56A07 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.7□□□□□ -0.06
Scn2bQ56A07 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn2bQ56A07 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms