Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Gm9726-201ENSMUST00000180321 678 ntBASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap2Q3V1H1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Gm11025-201ENSMUST00000140773 466 ntBASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap2Q3V1H1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Gm15483-201ENSMUST00000120338 456 ntBASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap2Q3V1H1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Gm6973-201ENSMUST00000117080 721 ntBASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap2Q3V1H1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ckap2Q3V1H1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap2Q3V1H1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms