Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsmem1Q3UQS2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsmem1Q3UQS2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Gm15483-201ENSMUST00000120338 456 ntBASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.06■□□□□ 0
Lsmem1Q3UQS2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsmem1Q3UQS2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Lsmem1Q3UQS2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Lsmem1Q3UQS2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsmem1Q3UQS2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsmem1Q3UQS2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Lsmem1Q3UQS2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsmem1Q3UQS2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Gm6973-201ENSMUST00000117080 721 ntBASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Gm9726-201ENSMUST00000180321 678 ntBASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsmem1Q3UQS2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms