Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gm13148-201ENSMUST00000118892 745 ntBASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gm43183-201ENSMUST00000200632 547 ntBASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cks1brtQ3UNC9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cks1brtQ3UNC9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms