Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Naf1Q3UMQ8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Mir449b-201ENSMUST00000104833 80 ntBASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Naf1Q3UMQ8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Naf1Q3UMQ8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Gm25287-201ENSMUST00000103846 110 ntBASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Gm22918-201ENSMUST00000103855 110 ntBASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Gm44872-201ENSMUST00000207864 420 ntBASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms