Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Gm7787-201ENSMUST00000216858 688 ntBASIC17.49■□□□□ 0.39
Limch1Q3UH68 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.49■□□□□ 0.39
Limch1Q3UH68 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Limch1Q3UH68 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.48■□□□□ 0.39
Limch1Q3UH68 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.48■□□□□ 0.39
Limch1Q3UH68 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Limch1Q3UH68 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Gm11025-201ENSMUST00000140773 466 ntBASIC17.47■□□□□ 0.39
Limch1Q3UH68 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.47■□□□□ 0.39
Limch1Q3UH68 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Limch1Q3UH68 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Limch1Q3UH68 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms