Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm14660-201ENSMUST00000119809 575 ntBASIC17.45■□□□□ 0.38
Col5a2Q3U962 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Gm42693-201ENSMUST00000196779 631 ntBASIC17.45■□□□□ 0.38
Col5a2Q3U962 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.45■□□□□ 0.38
Col5a2Q3U962 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.45■□□□□ 0.38
Col5a2Q3U962 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col5a2Q3U962 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.44■□□□□ 0.38
Col5a2Q3U962 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.44■□□□□ 0.38
Col5a2Q3U962 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.44■□□□□ 0.38
Col5a2Q3U962 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col5a2Q3U962 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col5a2Q3U962 Gm10478-201ENSMUST00000084451 396 ntBASIC17.44■□□□□ 0.38
Col5a2Q3U962 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.43■□□□□ 0.38
Col5a2Q3U962 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gm45784-201ENSMUST00000188360 142 ntBASIC17.43■□□□□ 0.38
Col5a2Q3U962 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.43■□□□□ 0.38
Col5a2Q3U962 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col5a2Q3U962 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.42■□□□□ 0.38
Col5a2Q3U962 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.42■□□□□ 0.38
Col5a2Q3U962 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Gm27839-201ENSMUST00000184242 106 ntBASIC17.42■□□□□ 0.38
Col5a2Q3U962 Gm33320-201ENSMUST00000192232 530 ntBASIC17.42■□□□□ 0.38
Col5a2Q3U962 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col5a2Q3U962 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms