Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Mmp25Q3U435 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp25Q3U435 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.99□□□□□ -0.17
Mmp25Q3U435 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp25Q3U435 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Rprl2-201ENSMUST00000157150 290 ntBASIC13.98□□□□□ -0.17
Mmp25Q3U435 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.98□□□□□ -0.17
Mmp25Q3U435 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.98□□□□□ -0.17
Mmp25Q3U435 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.98□□□□□ -0.17
Mmp25Q3U435 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp25Q3U435 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Gm6973-201ENSMUST00000117080 721 ntBASIC13.97□□□□□ -0.17
Mmp25Q3U435 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.97□□□□□ -0.17
Mmp25Q3U435 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp25Q3U435 Gm11543-201ENSMUST00000120758 370 ntBASIC13.97□□□□□ -0.17
Mmp25Q3U435 Gm11745-201ENSMUST00000121669 448 ntBASIC13.97□□□□□ -0.17
Mmp25Q3U435 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.97□□□□□ -0.17
Mmp25Q3U435 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms