Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.29□□□□□ -0.44
Trim63Q38HM4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.28□□□□□ -0.44
Trim63Q38HM4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.28□□□□□ -0.44
Trim63Q38HM4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim63Q38HM4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim63Q38HM4 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.27□□□□□ -0.45
Trim63Q38HM4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Gm43017-201ENSMUST00000198296 752 ntBASIC12.27□□□□□ -0.45
Trim63Q38HM4 Gm4974-201ENSMUST00000209974 875 ntBASIC12.27□□□□□ -0.45
Trim63Q38HM4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.27□□□□□ -0.45
Trim63Q38HM4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.27□□□□□ -0.45
Trim63Q38HM4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim63Q38HM4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim63Q38HM4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms