Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.41□□□□□ -0.1
Ptchd3Q0EEE2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Gm9103-201ENSMUST00000119371 405 ntBASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Gm28033-201ENSMUST00000184224 96 ntBASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ptchd3Q0EEE2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Gm10819-201ENSMUST00000099988 561 ntBASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ptchd3Q0EEE2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Gm4459-201ENSMUST00000118750 468 ntBASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
Ptchd3Q0EEE2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms