Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col10a1Q05306 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Col10a1Q05306 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col10a1Q05306 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.73□□□□□ -0.21
Col10a1Q05306 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Gm45747-201ENSMUST00000212203 999 ntBASIC13.73□□□□□ -0.21
Col10a1Q05306 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col10a1Q05306 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.73□□□□□ -0.21
Col10a1Q05306 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.73□□□□□ -0.21
Col10a1Q05306 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col10a1Q05306 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Gm16198-201ENSMUST00000118766 670 ntBASIC13.72□□□□□ -0.21
Col10a1Q05306 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.72□□□□□ -0.21
Col10a1Q05306 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.72□□□□□ -0.21
Col10a1Q05306 Gm10154-201ENSMUST00000084445 354 ntBASIC13.72□□□□□ -0.21
Col10a1Q05306 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.72□□□□□ -0.21
Col10a1Q05306 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.72□□□□□ -0.21
Col10a1Q05306 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col10a1Q05306 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col10a1Q05306 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Gm27301-201ENSMUST00000184012 127 ntBASIC13.71□□□□□ -0.21
Col10a1Q05306 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.71□□□□□ -0.21
Col10a1Q05306 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.71□□□□□ -0.21
Col10a1Q05306 Gm2272-201ENSMUST00000194903 582 ntBASIC13.71□□□□□ -0.21
Col10a1Q05306 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col10a1Q05306 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms