Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Brca2P97929 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca2P97929 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca2P97929 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Brca2P97929 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.15□□□□□ -0.14
Brca2P97929 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Brca2P97929 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.15□□□□□ -0.14
Brca2P97929 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brca2P97929 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.15□□□□□ -0.14
Brca2P97929 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brca2P97929 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.15□□□□□ -0.14
Brca2P97929 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brca2P97929 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Brca2P97929 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.14□□□□□ -0.15
Brca2P97929 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Gm12134-201ENSMUST00000122109 520 ntBASIC14.14□□□□□ -0.15
Brca2P97929 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.14□□□□□ -0.15
Brca2P97929 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Gm19220-201ENSMUST00000222682 803 ntBASIC14.14□□□□□ -0.15
Brca2P97929 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.14□□□□□ -0.15
Brca2P97929 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Brca2P97929 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.14□□□□□ -0.15
Brca2P97929 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Brca2P97929 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Gm27572-201ENSMUST00000183702 255 ntBASIC14.14□□□□□ -0.15
Brca2P97929 Gm44608-201ENSMUST00000206827 855 ntBASIC14.14□□□□□ -0.15
Brca2P97929 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.14□□□□□ -0.15
Brca2P97929 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Brca2P97929 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brca2P97929 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Gm12341-201ENSMUST00000119724 503 ntBASIC14.13□□□□□ -0.15
Brca2P97929 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Brca2P97929 Gm27631-201ENSMUST00000184163 466 ntBASIC14.13□□□□□ -0.15
Brca2P97929 Gm7561-201ENSMUST00000211203 886 ntBASIC14.13□□□□□ -0.15
Brca2P97929 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Brca2P97929 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Mir8109-201ENSMUST00000184375 117 ntBASIC14.13□□□□□ -0.15
Brca2P97929 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.13□□□□□ -0.15
Brca2P97929 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brca2P97929 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca2P97929 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Brca2P97929 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Brca2P97929 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca2P97929 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca2P97929 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Brca2P97929 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Brca2P97929 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca2P97929 Gm7584-201ENSMUST00000175829 940 ntBASIC14.12□□□□□ -0.15
Brca2P97929 Gm27243-201ENSMUST00000183964 521 ntBASIC14.12□□□□□ -0.15
Brca2P97929 Gm27731-201ENSMUST00000185192 107 ntBASIC14.12□□□□□ -0.15
Brca2P97929 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Brca2P97929 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.12□□□□□ -0.15
Brca2P97929 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms