Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcaP82350 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SgcaP82350 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SgcaP82350 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SgcaP82350 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.49□□□□□ -0.41
SgcaP82350 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.49□□□□□ -0.41
SgcaP82350 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.49□□□□□ -0.41
SgcaP82350 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcaP82350 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Gm11355-201ENSMUST00000121120 306 ntBASIC12.49□□□□□ -0.41
SgcaP82350 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcaP82350 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.49□□□□□ -0.41
SgcaP82350 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.49□□□□□ -0.41
SgcaP82350 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.49□□□□□ -0.41
SgcaP82350 Gm21559-201ENSMUST00000220638 855 ntBASIC12.49□□□□□ -0.41
SgcaP82350 Gm8587-201ENSMUST00000076538 843 ntBASIC12.49□□□□□ -0.41
SgcaP82350 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcaP82350 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SgcaP82350 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SgcaP82350 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcaP82350 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.48□□□□□ -0.41
SgcaP82350 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
SgcaP82350 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcaP82350 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcaP82350 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcaP82350 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcaP82350 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.48□□□□□ -0.41
SgcaP82350 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.48□□□□□ -0.41
SgcaP82350 Gm45058-201ENSMUST00000205810 766 ntBASIC12.48□□□□□ -0.41
SgcaP82350 Gm18959-201ENSMUST00000208954 655 ntBASIC12.48□□□□□ -0.41
SgcaP82350 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SgcaP82350 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SgcaP82350 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.48□□□□□ -0.41
SgcaP82350 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SgcaP82350 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcaP82350 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SgcaP82350 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcaP82350 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SgcaP82350 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcaP82350 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SgcaP82350 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcaP82350 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcaP82350 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.47□□□□□ -0.41
SgcaP82350 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcaP82350 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms