Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm12260-201ENSMUST00000122447 411 ntBASIC12.4□□□□□ -0.42
Pdlim4P70271 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.4□□□□□ -0.42
Pdlim4P70271 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim4P70271 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim4P70271 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim4P70271 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.4□□□□□ -0.42
Pdlim4P70271 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim4P70271 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pdlim4P70271 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pdlim4P70271 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 AW822252-206ENSMUST00000208904 237 ntBASIC12.39□□□□□ -0.43
Pdlim4P70271 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.39□□□□□ -0.43
Pdlim4P70271 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pdlim4P70271 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.38□□□□□ -0.43
Pdlim4P70271 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim4P70271 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms