Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lsm3P62311 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Lsm3P62311 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lsm3P62311 Gm44430-201ENSMUST00000203376 995 ntBASIC13.59□□□□□ -0.23
Lsm3P62311 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.59□□□□□ -0.23
Lsm3P62311 Odf3b-204ENSMUST00000227834 930 ntBASIC13.59□□□□□ -0.23
Lsm3P62311 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.59□□□□□ -0.23
Lsm3P62311 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lsm3P62311 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Lsm3P62311 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm3P62311 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lsm3P62311 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lsm3P62311 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Lsm3P62311 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Lsm3P62311 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.58□□□□□ -0.24
Lsm3P62311 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Lsm3P62311 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm3P62311 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Lsm3P62311 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm3P62311 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm3P62311 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm3P62311 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.57□□□□□ -0.24
Lsm3P62311 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Lsm3P62311 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Lsm3P62311 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm3P62311 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Lsm3P62311 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.57□□□□□ -0.24
Lsm3P62311 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.57□□□□□ -0.24
Lsm3P62311 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm3P62311 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.57□□□□□ -0.24
Lsm3P62311 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm3P62311 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm3P62311 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm3P62311 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm3P62311 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms