Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sf3b6P59708 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sf3b6P59708 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b6P59708 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b6P59708 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.22□□□□□ -0.29
Sf3b6P59708 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.22□□□□□ -0.29
Sf3b6P59708 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b6P59708 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b6P59708 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.21□□□□□ -0.29
Sf3b6P59708 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Gm44454-201ENSMUST00000198541 138 ntBASIC13.21□□□□□ -0.29
Sf3b6P59708 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.21□□□□□ -0.29
Sf3b6P59708 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b6P59708 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b6P59708 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.21□□□□□ -0.3
Sf3b6P59708 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.21□□□□□ -0.3
Sf3b6P59708 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b6P59708 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b6P59708 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b6P59708 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b6P59708 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.21□□□□□ -0.3
Sf3b6P59708 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b6P59708 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.2□□□□□ -0.3
Sf3b6P59708 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.2□□□□□ -0.3
Sf3b6P59708 Rprl3-201ENSMUST00000157400 290 ntBASIC13.2□□□□□ -0.3
Sf3b6P59708 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Gm43767-201ENSMUST00000198933 381 ntBASIC13.2□□□□□ -0.3
Sf3b6P59708 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sf3b6P59708 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b6P59708 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms