Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.54□□□□□ -0.08
Cdh5P55284 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Cdh5P55284 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdh5P55284 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh5P55284 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdh5P55284 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdh5P55284 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdh5P55284 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Cdh5P55284 Gm6089-201ENSMUST00000197666 938 ntBASIC14.53□□□□□ -0.08
Cdh5P55284 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdh5P55284 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdh5P55284 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.53□□□□□ -0.08
Cdh5P55284 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh5P55284 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Cdh5P55284 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdh5P55284 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdh5P55284 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cdh5P55284 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh5P55284 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdh5P55284 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh5P55284 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdh5P55284 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh5P55284 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdh5P55284 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh5P55284 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdh5P55284 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh5P55284 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdh5P55284 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Gm12350-201ENSMUST00000121208 462 ntBASIC14.51□□□□□ -0.09
Cdh5P55284 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.51□□□□□ -0.09
Cdh5P55284 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cdh5P55284 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdh5P55284 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdh5P55284 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh5P55284 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms