Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Nub1P54729 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nub1P54729 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nub1P54729 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nub1P54729 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Nub1P54729 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.01■□□□□ 0.15
Nub1P54729 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Nub1P54729 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Gm14494-201ENSMUST00000118786 435 ntBASIC16.01■□□□□ 0.15
Nub1P54729 Gm15467-201ENSMUST00000120582 445 ntBASIC16.01■□□□□ 0.15
Nub1P54729 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.01■□□□□ 0.15
Nub1P54729 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.01■□□□□ 0.15
Nub1P54729 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.01■□□□□ 0.15
Nub1P54729 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.01■□□□□ 0.15
Nub1P54729 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.01■□□□□ 0.15
Nub1P54729 Gm45747-201ENSMUST00000212203 999 ntBASIC16.01■□□□□ 0.15
Nub1P54729 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.01■□□□□ 0.15
Nub1P54729 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.01■□□□□ 0.15
Nub1P54729 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.01■□□□□ 0.15
Nub1P54729 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nub1P54729 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.01■□□□□ 0.15
Nub1P54729 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nub1P54729 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nub1P54729 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nub1P54729 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16■□□□□ 0.15
Nub1P54729 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Gm43332-201ENSMUST00000202511 1044 ntBASIC16■□□□□ 0.15
Nub1P54729 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 AC174742.1-201ENSMUST00000218272 304 ntBASIC16■□□□□ 0.15
Nub1P54729 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16■□□□□ 0.15
Nub1P54729 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nub1P54729 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nub1P54729 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Gm16198-201ENSMUST00000118766 670 ntBASIC15.99■□□□□ 0.15
Nub1P54729 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Gm5264-201ENSMUST00000190584 848 ntBASIC15.99■□□□□ 0.15
Nub1P54729 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.99■□□□□ 0.15
Nub1P54729 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Rubie-203ENSMUST00000227803 2430 ntBASIC15.99■□□□□ 0.15
Nub1P54729 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.99■□□□□ 0.15
Nub1P54729 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nub1P54729 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nub1P54729 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nub1P54729 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nub1P54729 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nub1P54729 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nub1P54729 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nub1P54729 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.98■□□□□ 0.15
Nub1P54729 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms