Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lbx1P52955 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Lbx1P52955 Mir8109-201ENSMUST00000184375 117 ntBASIC14.35□□□□□ -0.11
Lbx1P52955 Gm18054-201ENSMUST00000207539 555 ntBASIC14.35□□□□□ -0.11
Lbx1P52955 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.35□□□□□ -0.11
Lbx1P52955 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.35□□□□□ -0.11
Lbx1P52955 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lbx1P52955 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.35□□□□□ -0.11
Lbx1P52955 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lbx1P52955 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.34□□□□□ -0.11
Lbx1P52955 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.34□□□□□ -0.11
Lbx1P52955 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.34□□□□□ -0.11
Lbx1P52955 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lbx1P52955 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lbx1P52955 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lbx1P52955 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.34□□□□□ -0.11
Lbx1P52955 Gm26083-201ENSMUST00000157904 193 ntBASIC14.34□□□□□ -0.11
Lbx1P52955 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Gm45880-201ENSMUST00000213041 853 ntBASIC14.34□□□□□ -0.11
Lbx1P52955 Gm16476-201ENSMUST00000221544 139 ntBASIC14.34□□□□□ -0.11
Lbx1P52955 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Lbx1P52955 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lbx1P52955 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.34□□□□□ -0.11
Lbx1P52955 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lbx1P52955 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lbx1P52955 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lbx1P52955 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Lbx1P52955 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lbx1P52955 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Lbx1P52955 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lbx1P52955 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.33□□□□□ -0.12
Lbx1P52955 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lbx1P52955 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.32□□□□□ -0.12
Lbx1P52955 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.32□□□□□ -0.12
Lbx1P52955 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.32□□□□□ -0.12
Lbx1P52955 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.32□□□□□ -0.12
Lbx1P52955 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
Lbx1P52955 Gm5354-201ENSMUST00000182417 973 ntBASIC14.32□□□□□ -0.12
Lbx1P52955 Gm27516-201ENSMUST00000184237 98 ntBASIC14.32□□□□□ -0.12
Lbx1P52955 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.32□□□□□ -0.12
Lbx1P52955 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lbx1P52955 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms