Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.68□□□□□ -0.38
Hmga2P52927 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmga2P52927 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.67□□□□□ -0.38
Hmga2P52927 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Hmga2P52927 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.67□□□□□ -0.38
Hmga2P52927 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Hmga2P52927 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.67□□□□□ -0.38
Hmga2P52927 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmga2P52927 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga2P52927 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga2P52927 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmga2P52927 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmga2P52927 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmga2P52927 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Hmga2P52927 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmga2P52927 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmga2P52927 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmga2P52927 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmga2P52927 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga2P52927 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
Hmga2P52927 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmga2P52927 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmga2P52927 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.65□□□□□ -0.38
Hmga2P52927 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Gm27742-201ENSMUST00000184667 60 ntBASIC12.65□□□□□ -0.38
Hmga2P52927 Gm27867-201ENSMUST00000184778 125 ntBASIC12.65□□□□□ -0.38
Hmga2P52927 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmga2P52927 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Hmga2P52927 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga2P52927 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms