Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox2P48432 Gm12497-201ENSMUST00000138778 237 ntBASIC13.98□□□□□ -0.17
Sox2P48432 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Sox2P48432 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Sox2P48432 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Sox2P48432 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox2P48432 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox2P48432 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox2P48432 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox2P48432 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox2P48432 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox2P48432 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox2P48432 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox2P48432 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox2P48432 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox2P48432 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox2P48432 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox2P48432 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.97□□□□□ -0.17
Sox2P48432 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Sox2P48432 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.97□□□□□ -0.17
Sox2P48432 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox2P48432 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Sox2P48432 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox2P48432 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Gm12008-201ENSMUST00000117791 755 ntBASIC13.96□□□□□ -0.17
Sox2P48432 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox2P48432 Gm23634-201ENSMUST00000175071 91 ntBASIC13.96□□□□□ -0.17
Sox2P48432 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox2P48432 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.96□□□□□ -0.17
Sox2P48432 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox2P48432 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox2P48432 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox2P48432 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox2P48432 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox2P48432 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox2P48432 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox2P48432 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox2P48432 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox2P48432 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.95□□□□□ -0.18
Sox2P48432 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms