Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm9959-201ENSMUST00000068277 390 ntBASIC9.69□□□□□ -0.86
Xcl1P47993 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Xcl1P47993 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Xcl1P47993 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Xcl1P47993 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC9.69□□□□□ -0.86
Xcl1P47993 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Gm43056-201ENSMUST00000197865 2791 ntBASIC9.69□□□□□ -0.86
Xcl1P47993 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Xcl1P47993 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC9.68□□□□□ -0.86
Xcl1P47993 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Xcl1P47993 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC9.68□□□□□ -0.86
Xcl1P47993 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC9.68□□□□□ -0.86
Xcl1P47993 Gm18041-201ENSMUST00000218210 618 ntBASIC9.68□□□□□ -0.86
Xcl1P47993 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.68□□□□□ -0.86
Xcl1P47993 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC9.68□□□□□ -0.86
Xcl1P47993 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Xcl1P47993 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.67□□□□□ -0.86
Xcl1P47993 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Xcl1P47993 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC9.67□□□□□ -0.86
Xcl1P47993 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC9.67□□□□□ -0.86
Xcl1P47993 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC9.67□□□□□ -0.86
Xcl1P47993 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC9.67□□□□□ -0.86
Xcl1P47993 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC9.67□□□□□ -0.86
Xcl1P47993 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.67□□□□□ -0.86
Xcl1P47993 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.67□□□□□ -0.86
Xcl1P47993 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Xcl1P47993 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms