Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sdc2P43407 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sdc2P43407 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.71■□□□□ 0.27
Sdc2P43407 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sdc2P43407 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sdc2P43407 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Sdc2P43407 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.71■□□□□ 0.27
Sdc2P43407 Gm7222-201ENSMUST00000117512 906 ntBASIC16.71■□□□□ 0.27
Sdc2P43407 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sdc2P43407 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sdc2P43407 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.71■□□□□ 0.27
Sdc2P43407 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.71■□□□□ 0.27
Sdc2P43407 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sdc2P43407 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.71■□□□□ 0.27
Sdc2P43407 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sdc2P43407 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Sdc2P43407 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Sdc2P43407 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.7■□□□□ 0.26
Sdc2P43407 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sdc2P43407 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.7■□□□□ 0.26
Sdc2P43407 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sdc2P43407 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.7■□□□□ 0.26
Sdc2P43407 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sdc2P43407 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdc2P43407 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 Gm24589-201ENSMUST00000116692 94 ntBASIC16.69■□□□□ 0.26
Sdc2P43407 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.69■□□□□ 0.26
Sdc2P43407 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.69■□□□□ 0.26
Sdc2P43407 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.69■□□□□ 0.26
Sdc2P43407 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.69■□□□□ 0.26
Sdc2P43407 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdc2P43407 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdc2P43407 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sdc2P43407 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.68■□□□□ 0.26
Sdc2P43407 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Rps4l-201ENSMUST00000071745 943 ntBASIC16.68■□□□□ 0.26
Sdc2P43407 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms