Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Abca1P41233 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.41□□□□□ -0.42
Abca1P41233 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Abca1P41233 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Abca1P41233 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Abca1P41233 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.4□□□□□ -0.42
Abca1P41233 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Abca1P41233 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.4□□□□□ -0.42
Abca1P41233 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Gm38294-201ENSMUST00000192831 381 ntBASIC12.4□□□□□ -0.42
Abca1P41233 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Abca1P41233 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Abca1P41233 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.43
Abca1P41233 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Abca1P41233 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Abca1P41233 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Abca1P41233 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Abca1P41233 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Abca1P41233 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Abca1P41233 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Gm13823-201ENSMUST00000119930 345 ntBASIC12.39□□□□□ -0.43
Abca1P41233 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.39□□□□□ -0.43
Abca1P41233 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Abca1P41233 Gm27437-201ENSMUST00000183429 107 ntBASIC12.39□□□□□ -0.43
Abca1P41233 Gm7730-201ENSMUST00000212486 454 ntBASIC12.39□□□□□ -0.43
Abca1P41233 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.39□□□□□ -0.43
Abca1P41233 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Abca1P41233 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Abca1P41233 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Gm13216-201ENSMUST00000117145 591 ntBASIC12.39□□□□□ -0.43
Abca1P41233 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.39□□□□□ -0.43
Abca1P41233 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.39□□□□□ -0.43
Abca1P41233 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.39□□□□□ -0.43
Abca1P41233 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.39□□□□□ -0.43
Abca1P41233 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Abca1P41233 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.38□□□□□ -0.43
Abca1P41233 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms