Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Foxa1P35582 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Foxa1P35582 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.77□□□□□ -0.21
Foxa1P35582 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Foxa1P35582 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Foxa1P35582 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.77□□□□□ -0.21
Foxa1P35582 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.77□□□□□ -0.21
Foxa1P35582 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Foxa1P35582 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Foxa1P35582 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Foxa1P35582 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Foxa1P35582 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Foxa1P35582 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Foxa1P35582 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.76□□□□□ -0.21
Foxa1P35582 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Foxa1P35582 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Foxa1P35582 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Foxa1P35582 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Foxa1P35582 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.76□□□□□ -0.21
Foxa1P35582 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.76□□□□□ -0.21
Foxa1P35582 Gm9385-201ENSMUST00000117563 472 ntBASIC13.76□□□□□ -0.21
Foxa1P35582 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Foxa1P35582 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Foxa1P35582 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.76□□□□□ -0.21
Foxa1P35582 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Foxa1P35582 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.76□□□□□ -0.21
Foxa1P35582 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Foxa1P35582 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.76□□□□□ -0.21
Foxa1P35582 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.75□□□□□ -0.21
Foxa1P35582 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Foxa1P35582 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Foxa1P35582 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.75□□□□□ -0.21
Foxa1P35582 Gm17271-201ENSMUST00000165535 355 ntBASIC13.75□□□□□ -0.21
Foxa1P35582 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Foxa1P35582 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms