Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm37179-201ENSMUST00000194862 823 ntBASIC13.78□□□□□ -0.2
Nedd8P29595 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Gm10602-201ENSMUST00000098239 609 ntBASIC13.78□□□□□ -0.2
Nedd8P29595 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.78□□□□□ -0.2
Nedd8P29595 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nedd8P29595 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd8P29595 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.77□□□□□ -0.2
Nedd8P29595 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.77□□□□□ -0.2
Nedd8P29595 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nedd8P29595 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nedd8P29595 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Nedd8P29595 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nedd8P29595 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nedd8P29595 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Odf3b-204ENSMUST00000227834 930 ntBASIC13.77□□□□□ -0.21
Nedd8P29595 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nedd8P29595 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Nedd8P29595 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.77□□□□□ -0.21
Nedd8P29595 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nedd8P29595 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nedd8P29595 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.76□□□□□ -0.21
Nedd8P29595 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.76□□□□□ -0.21
Nedd8P29595 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Nedd8P29595 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nedd8P29595 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.76□□□□□ -0.21
Nedd8P29595 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.76□□□□□ -0.21
Nedd8P29595 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nedd8P29595 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nedd8P29595 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.76□□□□□ -0.21
Nedd8P29595 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nedd8P29595 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nedd8P29595 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nedd8P29595 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.75□□□□□ -0.21
Nedd8P29595 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.75□□□□□ -0.21
Nedd8P29595 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms