Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.28□□□□□ -0.12
Cntn1P12960 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Gm8396-201ENSMUST00000057361 823 ntBASIC14.28□□□□□ -0.12
Cntn1P12960 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cntn1P12960 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.28□□□□□ -0.12
Cntn1P12960 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cntn1P12960 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cntn1P12960 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.28□□□□□ -0.12
Cntn1P12960 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cntn1P12960 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn1P12960 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cntn1P12960 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.27□□□□□ -0.13
Cntn1P12960 Mir6990-201ENSMUST00000183724 91 ntBASIC14.27□□□□□ -0.13
Cntn1P12960 Gm43767-201ENSMUST00000198933 381 ntBASIC14.27□□□□□ -0.13
Cntn1P12960 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Cntn1P12960 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cntn1P12960 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.27□□□□□ -0.13
Cntn1P12960 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.27□□□□□ -0.13
Cntn1P12960 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cntn1P12960 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cntn1P12960 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cntn1P12960 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cntn1P12960 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cntn1P12960 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn1P12960 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Cntn1P12960 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.27□□□□□ -0.13
Cntn1P12960 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.26□□□□□ -0.13
Cntn1P12960 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Cntn1P12960 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cntn1P12960 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.26□□□□□ -0.13
Cntn1P12960 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cntn1P12960 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cntn1P12960 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cntn1P12960 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.26□□□□□ -0.13
Cntn1P12960 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cntn1P12960 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.26□□□□□ -0.13
Cntn1P12960 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cntn1P12960 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.26□□□□□ -0.13
Cntn1P12960 Gm18057-201ENSMUST00000208220 503 ntBASIC14.26□□□□□ -0.13
Cntn1P12960 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.26□□□□□ -0.13
Cntn1P12960 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cntn1P12960 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn1P12960 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.25□□□□□ -0.13
Cntn1P12960 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms