Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ly6c1P0CW02 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Gm45612-201ENSMUST00000211320 160 ntBASIC12.44□□□□□ -0.42
Ly6c1P0CW02 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ly6c1P0CW02 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm27494-201ENSMUST00000184735 189 ntBASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.43□□□□□ -0.42
Ly6c1P0CW02 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Chchd1-203ENSMUST00000224633 557 ntBASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.43□□□□□ -0.42
Ly6c1P0CW02 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Efs-202ENSMUST00000227037 2540 ntBASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ly6c1P0CW02 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms