Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UbbP0CG49 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UbbP0CG49 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UbbP0CG49 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.97□□□□□ -0.33
UbbP0CG49 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.97□□□□□ -0.33
UbbP0CG49 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.97□□□□□ -0.33
UbbP0CG49 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
UbbP0CG49 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UbbP0CG49 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.97□□□□□ -0.33
UbbP0CG49 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
UbbP0CG49 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UbbP0CG49 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.96□□□□□ -0.33
UbbP0CG49 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.96□□□□□ -0.33
UbbP0CG49 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UbbP0CG49 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.96□□□□□ -0.33
UbbP0CG49 Gm15372-201ENSMUST00000120729 834 ntBASIC12.96□□□□□ -0.33
UbbP0CG49 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
UbbP0CG49 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.96□□□□□ -0.33
UbbP0CG49 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.96□□□□□ -0.33
UbbP0CG49 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.96□□□□□ -0.33
UbbP0CG49 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
UbbP0CG49 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UbbP0CG49 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.96□□□□□ -0.34
UbbP0CG49 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UbbP0CG49 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.95□□□□□ -0.34
UbbP0CG49 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UbbP0CG49 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UbbP0CG49 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.95□□□□□ -0.34
UbbP0CG49 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.95□□□□□ -0.34
UbbP0CG49 Gm6659-201ENSMUST00000174752 547 ntBASIC12.95□□□□□ -0.34
UbbP0CG49 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.95□□□□□ -0.34
UbbP0CG49 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.95□□□□□ -0.34
UbbP0CG49 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.95□□□□□ -0.34
UbbP0CG49 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UbbP0CG49 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UbbP0CG49 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UbbP0CG49 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.94□□□□□ -0.34
UbbP0CG49 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.94□□□□□ -0.34
UbbP0CG49 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.94□□□□□ -0.34
UbbP0CG49 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.94□□□□□ -0.34
UbbP0CG49 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UbbP0CG49 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms