Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm10576-201ENSMUST00000191927 825 ntBASIC13.49□□□□□ -0.25
Lmx1bO88609 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.49□□□□□ -0.25
Lmx1bO88609 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.49□□□□□ -0.25
Lmx1bO88609 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lmx1bO88609 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Lmx1bO88609 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.48□□□□□ -0.25
Lmx1bO88609 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.48□□□□□ -0.25
Lmx1bO88609 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.48□□□□□ -0.25
Lmx1bO88609 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.48□□□□□ -0.25
Lmx1bO88609 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lmx1bO88609 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lmx1bO88609 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lmx1bO88609 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.47□□□□□ -0.25
Lmx1bO88609 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.47□□□□□ -0.25
Lmx1bO88609 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.47□□□□□ -0.25
Lmx1bO88609 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Lmx1bO88609 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lmx1bO88609 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.47□□□□□ -0.25
Lmx1bO88609 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms